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Congenica Splice Site Finder White Paper
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"Congenica Splice Site Finder White Paper"

Congenica Splice Site Finder (CSSF) is an algorithm that determines the splicing functionality of a given DNA sequence.

It compares the functionality of a wildtype sequence against that of a mutated sequence in order to determine the effect a variant has on splicing activity. 

CCSF was designed as an updated implementation of SpliceSite-Finder (SSF). An older re-implementation of SSF, SpliceSiteFinder-like (SSFL) is,recommended for use in the Association for Clinical Genomic Science (ACGS) guidelines for variant interpretation.

This white paper describes how CSSF was designed and compares its performance to SSFL.

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