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Using QuPath to analyze RNAscope, BaseScope and miRNAscope images
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"Using QuPath to analyze RNAscope, BaseScope and miRNAscope images"

QuPath, short for Quantitative Pathology, is a free open source bioimage analysis software for whole slide images developed at the University of Edinburgh.

This guide introduces the basic workflow for using QuPath to quantify images from chromogenic and fluorescent RNAscope assays; chromogenic BaseScope assays and chromogenic miRNAscope assays.


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